STRINGSTRING
Noca_4105 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4105" - Extracellular ligand-binding receptor in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4105Extracellular ligand-binding receptor (407 aa)    
Predicted Functional Partners:
Noca_4104
Inner-membrane translocator (290 aa)
 
          0.826
Noca_4103
ABC transporter-like protein (582 aa)
 
          0.819
Noca_2147
Inner-membrane translocator (290 aa)
   
          0.754
Noca_4123
Inner-membrane translocator (352 aa)
   
          0.744
Noca_0216
ABC transporter-like protein (565 aa)
   
          0.711
Noca_2112
Inner-membrane translocator (376 aa)
   
          0.704
Noca_0217
Inner-membrane translocator (309 aa)
   
          0.703
Noca_4102
ABC transporter-like protein (249 aa)
 
          0.701
Noca_4443
Extracellular ligand-binding receptor (413 aa)
   
          0.698
Noca_2146
ABC transporter-like protein (606 aa)
   
          0.676
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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