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Noca_4120 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4120" - Short-chain dehydrogenase/reductase SDR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4120Short-chain dehydrogenase/reductase SDR (310 aa)    
Predicted Functional Partners:
Noca_2781
Dehydratase (282 aa)
  0.932
Noca_4118
Beta-ketoacyl synthase (408 aa)
 
  0.911
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
  0.881
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
   
  0.881
Noca_2742
Short chain dehydrogenase (252 aa)
 
        0.860
Noca_2745
Putative CoA transferase subunit beta (256 aa)
 
   
  0.849
Noca_4135
Dehydratase (155 aa)
 
  0.844
Noca_2744
Coenzyme A transferase (293 aa)
 
 
    0.827
Noca_3534
Dehydratase (150 aa)
 
  0.823
Noca_4126
L-carnitine dehydratase/bile acid-inducible protein F (381 aa)
   
 
  0.795
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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