STRINGSTRING
Noca_4121 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4121" - AMP-dependent synthetase and ligase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4121AMP-dependent synthetase and ligase (560 aa)    
Predicted Functional Partners:
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
  0.921
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
   
  0.921
Noca_4126
L-carnitine dehydratase/bile acid-inducible protein F (381 aa)
   
   
  0.917
Noca_2725
acyl-CoA synthetase (548 aa)
 
   
  0.888
Noca_4123
Inner-membrane translocator (352 aa)
   
        0.865
Noca_4122
Inner-membrane translocator (281 aa)
   
        0.863
Noca_4124
ABC transporter-like protein (254 aa)
              0.863
Noca_4125
ABC transporter-like protein (235 aa)
              0.862
Noca_4551
Carbamoyl-phosphate synthase subunit L (633 aa)
   
 
  0.837
Noca_4118
Beta-ketoacyl synthase (408 aa)
     
  0.807
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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