STRINGSTRING
Noca_4132 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4132" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4132Hypothetical protein (149 aa)    
Predicted Functional Partners:
Noca_4131
Putative lipid-transfer protein (382 aa)
 
          0.970
Noca_4133
Short-chain dehydrogenase/reductase SDR (270 aa)
 
          0.888
Noca_4134
acyl-CoA dehydrogenase domain-containing protein (413 aa)
 
          0.879
Noca_4130
acyl-CoA dehydrogenase domain-containing protein (437 aa)
 
          0.824
Noca_4136
propionyl-CoA carboxylase (522 aa)
              0.756
Noca_4135
Dehydratase (155 aa)
              0.756
Noca_4128
acyl-CoA dehydrogenase domain-containing protein (352 aa)
 
          0.749
Noca_0941
Lipid-transfer protein (398 aa)
 
          0.703
Noca_4129
Aminoglycoside phosphotransferase (358 aa)
              0.691
Noca_4369
Hypothetical protein (146 aa)
   
          0.592
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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