STRINGSTRING
Noca_4179 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4179" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4179Hypothetical protein (67 aa)    
Predicted Functional Partners:
Noca_4178
Glycoside hydrolase 15-like protein (602 aa)
              0.859
Noca_4177
Alcohol dehydrogenase (358 aa)
              0.859
Noca_4176
Mandelate racemase/muconate lactonizing protein (376 aa)
              0.805
Noca_4175
Thiamine pyrophosphate protein (593 aa)
              0.805
Noca_4174
FAD linked oxidase domain-containing protein (1000 aa)
              0.805
Noca_4173
Short chain dehydrogenase (335 aa)
              0.805
Noca_4180
Hypothetical protein (417 aa)
              0.568
Noca_4182
NAD-dependent epimerase/dehydratase (317 aa)
              0.487
Noca_4181
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (326 aa)
              0.487
Noca_4172
Hypothetical protein (158 aa)
              0.452
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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