STRINGSTRING
Noca_4183 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4183" - HNH endonuclease in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4183HNH endonuclease (434 aa)    
Predicted Functional Partners:
Noca_1741
HNH nuclease (414 aa)
   
          0.758
Noca_1463
HNH nuclease (414 aa)
   
          0.758
Noca_2809
HNH endonuclease (255 aa)
   
          0.727
Noca_2384
Hypothetical protein (331 aa)
   
          0.721
Noca_2758
Hypothetical protein (441 aa)
   
          0.711
Noca_1280
HNH nuclease (414 aa)
   
          0.706
Noca_3520
Hypothetical protein (314 aa)
   
          0.647
Noca_2535
Hypothetical protein (321 aa)
   
          0.590
Noca_1896
Putative DNA-directed DNA polymerase (520 aa)
   
          0.571
Noca_2964
HhH-GPD family protein (188 aa)
   
        0.565
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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