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Noca_4198 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4198" - Short-chain dehydrogenase/reductase SDR in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4198Short-chain dehydrogenase/reductase SDR (263 aa)    
Predicted Functional Partners:
Noca_3483
Ribose-5-phosphate isomerase B (162 aa)
 
   
  0.905
Noca_4197
GntR family transcriptional regulator (255 aa)
         
  0.866
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
 
  0.847
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
   
 
  0.847
Noca_0796
Short-chain dehydrogenase/reductase SDR (249 aa)
   
  0.836
Noca_4199
Aldehyde dehydrogenase (522 aa)
              0.819
Noca_0003
6-phosphogluconate dehydrogenase (301 aa)
         
  0.812
Noca_2446
Ribulose-phosphate 3-epimerase (220 aa)
       
    0.804
Noca_1990
(acyl-carrier-protein) S-malonyltransferase (399 aa)
 
   
  0.801
Noca_4563
acetyl-CoA acetyltransferase (403 aa)
   
 
  0.793
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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