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Noca_4223 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4223" - dTDP-6-deoxy-L-hexose 3-O-methyltransferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4223dTDP-6-deoxy-L-hexose 3-O-methyltransferase (273 aa)    
Predicted Functional Partners:
Noca_4220
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
              0.869
Noca_4222
Transketolase (270 aa)
              0.859
Noca_4221
Transketolase subunit B (307 aa)
              0.859
Noca_4217
Group 1 glycosyl transferase (418 aa)
 
          0.727
Noca_4218
Type 11 methyltransferase (261 aa)
              0.706
Noca_4219
Sugar transferase (195 aa)
              0.697
Noca_4224
Hypothetical protein (566 aa)
              0.609
Noca_4216
Type 11 methyltransferase (277 aa)
              0.519
Noca_2138
Class II aldolase/adducin family protein (246 aa)
   
          0.492
Noca_4225
Hypothetical protein (137 aa)
              0.431
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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