STRINGSTRING
Noca_4224 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4224" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4224Hypothetical protein (566 aa)    
Predicted Functional Partners:
Noca_4185
Lipopolysaccharide biosynthesis protein (473 aa)
 
          0.722
Noca_3017
Extracellular ligand-binding receptor (426 aa)
   
          0.671
Noca_4220
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
              0.616
Noca_4223
dTDP-6-deoxy-L-hexose 3-O-methyltransferase (273 aa)
              0.609
Noca_4222
Transketolase (270 aa)
              0.609
Noca_4221
Transketolase subunit B (307 aa)
              0.609
Noca_3015
ABC transporter-like protein (327 aa)
   
          0.598
Noca_4225
Hypothetical protein (137 aa)
              0.586
Noca_4153
Hypothetical protein (863 aa)
   
          0.542
Noca_4219
Sugar transferase (195 aa)
              0.538
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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