STRINGSTRING
Noca_4305 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4305" - Transcriptional regulator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4305Transcriptional regulator (261 aa)    
Predicted Functional Partners:
Noca_4304
Hypothetical protein (229 aa)
              0.861
Noca_2101
Multicopper oxidase, type 3 (911 aa)
 
          0.781
Noca_4302
Hemerythrin HHE cation binding domain-containing protein (168 aa)
 
          0.763
Noca_2102
Hypothetical protein (378 aa)
 
          0.761
Noca_4303
4Fe-4S ferredoxin (114 aa)
              0.724
Noca_3980
Hemerythrin HHE cation binding domain-containing protein (279 aa)
 
          0.539
Noca_4301
Hypothetical protein (91 aa)
              0.454
Noca_1348
Respiratory nitrate reductase chaperone NarJ (236 aa)
 
          0.441
Noca_3156
phenylacetate-CoA oxygenase subunit PaaJ (161 aa)
   
   
  0.423
Noca_2556
Hypothetical protein (122 aa)
   
   
  0.423
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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