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Noca_4321 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4321" - ArsR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4321ArsR family transcriptional regulator (200 aa)    
Predicted Functional Partners:
Noca_4320
Hypothetical protein (119 aa)
              0.859
Noca_4322
Major facilitator transporter (418 aa)
 
          0.819
Noca_4346
Helix-turn-helix, type 11 domain-containing protein (330 aa)
   
          0.763
Noca_0189
LuxR family transcriptional regulator (340 aa)
   
          0.704
Noca_2037
Hypothetical protein (154 aa)
   
          0.673
Noca_1890
Hypothetical protein (318 aa)
   
          0.669
Noca_0308
Hypothetical protein (482 aa)
   
          0.656
Noca_0307
Hypothetical protein (451 aa)
   
          0.653
Noca_4319
Hypothetical protein (445 aa)
              0.625
Noca_3343
Dienelactone hydrolase (200 aa)
   
          0.610
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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