STRINGSTRING
Noca_4378 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4378" - Cupin 4 family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4378Cupin 4 family protein (403 aa)    
Predicted Functional Partners:
Noca_4377
Sucraseferredoxin family protein (303 aa)
 
          0.932
Noca_4379
Hypothetical protein (74 aa)
              0.859
Noca_4380
Sucraseferredoxin family protein (284 aa)
 
          0.853
Noca_4376
Putative integral membrane protein (250 aa)
              0.576
Noca_4375
Cytochrome P450 (464 aa)
 
          0.529
Noca_4381
Radical SAM domain-containing protein (381 aa)
              0.515
Noca_4152
Hypothetical protein (201 aa)
   
          0.480
Noca_0938
GDSL family lipase (348 aa)
   
          0.480
atpE
H+-transporting two-sector ATPase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (69 aa)
   
          0.471
Noca_4566
Abortive infection protein (233 aa)
   
          0.448
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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