STRINGSTRING
Noca_4406 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4406" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4406Hypothetical protein (92 aa)    
Predicted Functional Partners:
Noca_4407
SSS family solute/sodium (Na+) symporter (613 aa)
 
          0.969
Noca_4408
Hypothetical protein (164 aa)
 
          0.670
Noca_4409
Hypothetical protein (274 aa)
 
          0.533
Noca_1384
Hypothetical protein (184 aa)
   
          0.527
Noca_0123
Regulatory protein TetR (187 aa)
   
          0.526
Noca_0428
Beta-lactamase domain-containing protein (366 aa)
   
          0.461
Noca_2343
Phosphoribosyltransferase (163 aa)
   
          0.447
Noca_2494
Hypothetical protein (115 aa)
   
          0.428
Noca_3700
Hypothetical protein (473 aa)
   
          0.417
Noca_1191
N-acetyltransferase GCN5 (296 aa)
   
          0.416
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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