STRINGSTRING
Noca_4408 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4408" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4408Hypothetical protein (164 aa)    
Predicted Functional Partners:
Noca_4409
Hypothetical protein (274 aa)
 
          0.909
Noca_0973
Regulatory protein TetR (208 aa)
   
          0.693
Noca_4406
Hypothetical protein (92 aa)
 
          0.670
Noca_2336
Hypothetical protein (144 aa)
   
          0.640
Noca_0995
Hypothetical protein (201 aa)
   
          0.639
Noca_4407
SSS family solute/sodium (Na+) symporter (613 aa)
              0.633
Noca_4689
N-acetyltransferase GCN5 (224 aa)
   
          0.539
Noca_1190
Hypothetical protein (324 aa)
   
          0.535
Noca_1152
Hypothetical protein (310 aa)
   
          0.535
Noca_4410
Hypothetical protein (51 aa)
              0.531
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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