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Noca_4419 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4419" - BadM/Rrf2 family transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4419BadM/Rrf2 family transcriptional regulator (152 aa)    
Predicted Functional Partners:
Noca_3142
Cysteine desulfurase (379 aa)
 
 
  0.792
Noca_3446
Class V aminotransferase (399 aa)
 
 
  0.786
Noca_4420
Hypothetical protein (298 aa)
 
          0.725
Noca_0939
Cystathionine beta-synthase (462 aa)
         
  0.618
Noca_2555
NifU family SUF system FeS assembly protein (150 aa)
   
   
  0.605
Noca_3146
Iron-sulfur cluster assembly accessory protein (120 aa)
   
   
  0.520
Noca_3807
Cysteine desulfurase (399 aa)
       
  0.518
Noca_3438
Cysteine desulfurase (445 aa)
       
  0.518
Noca_2695
Class V aminotransferase (570 aa)
       
  0.518
Noca_2554
SufS subfamily cysteine desulfurase (428 aa)
       
  0.518
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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