STRINGSTRING
Noca_4476 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4476" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4476Hypothetical protein (376 aa)    
Predicted Functional Partners:
Noca_4474
Peptidase M24 (415 aa)
 
   
  0.933
Noca_4475
6-phosphogluconate dehydrogenase (318 aa)
 
        0.909
Noca_4473
Succinate semialdehyde dehydrogenase (486 aa)
   
        0.787
Noca_1007
Phosphoesterase (305 aa)
   
          0.643
Noca_4479
LacI family transcriptional regulator (342 aa)
              0.618
Noca_4478
Major facilitator transporter (398 aa)
              0.618
Noca_4477
Extracellular solute-binding protein (292 aa)
              0.618
Noca_1603
Phosphatidylinositol-3-phosphate phosphatase (273 aa)
   
          0.575
Noca_1634
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (972 aa)
 
   
    0.562
Noca_1011
4-carboxymuconolactone decarboxylase (402 aa)
   
   
  0.450
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]