STRINGSTRING
Noca_4503 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4503" - Reductase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4503Reductase (267 aa)    
Predicted Functional Partners:
Noca_4504
Patatin (293 aa)
              0.763
Noca_2742
Short chain dehydrogenase (252 aa)
 
          0.663
Noca_0689
Short-chain dehydrogenase/reductase SDR (269 aa)
   
          0.591
Noca_2766
Short chain dehydrogenase (260 aa)
 
          0.584
Noca_4502
Carboxyl transferase (497 aa)
              0.540
Noca_4018
ABC-type branched-chain amino acid transport systems periplasmic component-like (481 aa)
   
          0.535
Noca_2813
Short-chain dehydrogenase/reductase SDR (251 aa)
   
          0.501
Noca_3954
Nuclear transport factor 2 (124 aa)
 
          0.481
Noca_2814
Short-chain dehydrogenase/reductase SDR (309 aa)
   
          0.473
Noca_2793
Alpha/beta hydrolase domain-containing protein (420 aa)
   
          0.465
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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