STRINGSTRING
Noca_4509 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4509" - Pyruvate dehydrogenase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4509Pyruvate dehydrogenase (398 aa)    
Predicted Functional Partners:
Noca_4508
Transketolase, central region (326 aa)
  0.999
Noca_3770
Transketolase, central region (347 aa)
  0.999
Noca_4507
Dehydrogenase catalytic domain-containing protein (474 aa)
 
  0.999
Noca_4453
Dehydrogenase catalytic domain-containing protein (427 aa)
 
  0.999
Noca_1737
Alpha-ketoglutarate decarboxylase (1263 aa)
   
  0.997
Noca_2304
Dihydrolipoamide dehydrogenase (459 aa)
 
  0.992
Noca_3517
Flavoprotein disulfide reductase (465 aa)
 
  0.991
Noca_4454
Dehydrogenase, E1 component (726 aa)
 
0.991
Noca_3518
Dihydrolipoamide dehydrogenase (464 aa)
   
  0.989
Noca_2303
2-oxoglutarate dehydrogenase E2 component (597 aa)
 
  0.988
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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