STRINGSTRING
Noca_4557 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4557" - TetR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4557TetR family transcriptional regulator (199 aa)    
Predicted Functional Partners:
Noca_4555
Hypothetical protein (584 aa)
 
          0.964
Noca_4556
Hypothetical protein (266 aa)
 
          0.946
Noca_4552
propionyl-CoA carboxylase (534 aa)
 
          0.897
Noca_4550
acyl-CoA dehydrogenase domain-containing protein (386 aa)
 
          0.879
Noca_4554
acyl-CoA dehydrogenase domain-containing protein (386 aa)
              0.878
Noca_4553
Activator of Hsp90 ATPase 1 family protein (161 aa)
              0.859
Noca_4551
Carbamoyl-phosphate synthase subunit L (633 aa)
              0.681
Noca_4559
Prolyl aminopeptidase 2 (421 aa)
              0.583
Noca_4558
RDD domain-containing protein (272 aa)
              0.583
Noca_2661
L-lysine 2,3-aminomutase (468 aa)
   
          0.477
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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