STRINGSTRING
Noca_4575 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4575" - Extracellular solute-binding protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4575Extracellular solute-binding protein (297 aa)    
Predicted Functional Partners:
Noca_4574
Polar amino acid ABC transporter inner membrane subunit (241 aa)
  0.985
Noca_4573
ABC transporter-like protein (245 aa)
 
  0.979
Noca_3011
Polar amino acid ABC transporter, inner membrane subunit (264 aa)
  0.950
Noca_3012
ABC transporter-like protein (244 aa)
 
  0.938
Noca_4577
2,4-dienoyl-CoA reductase (668 aa)
   
   
  0.654
Noca_4576
PadR family transcriptional regulator (181 aa)
              0.625
Noca_4578
Class I and II aminotransferase (386 aa)
              0.620
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
         
  0.614
Noca_0417
Hypothetical protein (144 aa)
   
          0.529
Noca_4127
Extracellular ligand-binding receptor (400 aa)
     
 
  0.528
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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