STRINGSTRING
Noca_4612 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4612" - PadR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4612PadR family transcriptional regulator (234 aa)    
Predicted Functional Partners:
Noca_4611
Hypothetical protein (152 aa)
              0.859
Noca_1918
Siderophore-interacting protein (257 aa)
 
   
  0.621
Noca_1483
ABC transporter (269 aa)
 
     
  0.555
Noca_4610
Hypothetical protein (367 aa)
              0.526
Noca_4613
Thimet oligopeptidase (641 aa)
              0.491
Noca_4411
FAD-binding 9, siderophore-interacting domain-containing protein (120 aa)
   
   
  0.426
Noca_2544
ABC transporter (265 aa)
         
  0.423
Noca_0479
ABC transporter (245 aa)
         
  0.423
Noca_0121
ABC transporter (252 aa)
         
  0.423
Noca_1482
Daunorubicin resistance ABC transporter ATPase subunit (344 aa)
 
     
  0.421
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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