STRINGSTRING
Noca_4624 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4624" - Lysine exporter protein LysE/YggA in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4624Lysine exporter protein LysE/YggA (213 aa)    
Predicted Functional Partners:
Noca_3659
Lysine exporter protein LysE/YggA (233 aa)
   
        0.773
Noca_4622
Ribokinase-like domain-containing protein (369 aa)
   
        0.649
Noca_4623
Hypothetical protein (427 aa)
              0.640
psuG
Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5’- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway (307 aa)
              0.640
Noca_3472
N-acetyltransferase GCN5 (301 aa)
 
          0.480
Noca_3162
AzlC family protein (236 aa)
 
          0.459
Noca_2339
Major facilitator transporter (421 aa)
   
          0.410
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]