STRINGSTRING
Noca_4630 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4630" - Glycoside hydrolase family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4630Glycoside hydrolase family protein (744 aa)    
Predicted Functional Partners:
Noca_4631
Glycoside hydrolase 15-like protein (386 aa)
 
   
  0.964
Noca_4632
Extracellular solute-binding protein (419 aa)
 
     
  0.917
Noca_4629
Hypothetical protein (255 aa)
              0.859
Noca_4634
Binding-protein-dependent transport systems inner membrane component (292 aa)
 
          0.717
Noca_4635
ROK family protein (401 aa)
 
     
  0.678
Noca_1811
Alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (862 aa)
   
 
  0.655
Noca_4688
Thioredoxin (108 aa)
     
    0.643
Noca_2203
Redoxin domain-containing protein (203 aa)
     
    0.643
Noca_2202
Redoxin domain-containing protein (194 aa)
     
    0.643
Noca_2076
Redoxin domain-containing protein (169 aa)
     
    0.643
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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