STRINGSTRING
Noca_4631 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4631" - Glycoside hydrolase 15-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4631Glycoside hydrolase 15-like protein (386 aa)    
Predicted Functional Partners:
Noca_4630
Glycoside hydrolase family protein (744 aa)
 
   
  0.964
Noca_4632
Extracellular solute-binding protein (419 aa)
 
          0.881
Noca_4629
Hypothetical protein (255 aa)
              0.859
Noca_3994
Alpha,alpha-trehalose-phosphate synthase (482 aa)
   
 
  0.714
Noca_3709
Peptidase S15 (519 aa)
   
          0.705
Noca_4635
ROK family protein (401 aa)
 
          0.671
Noca_2197
Alkylmercury lyase (317 aa)
   
          0.655
Noca_4634
Binding-protein-dependent transport systems inner membrane component (292 aa)
 
          0.569
Noca_4633
Binding-protein-dependent transport systems inner membrane component (275 aa)
 
          0.559
Noca_2754
Hypothetical protein (526 aa)
   
          0.546
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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