STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4638PFAM: GCN5-related N-acetyltransferase; KEGG: lxx:Lxx17400 acetyltransferase. (222 aa)    
Predicted Functional Partners:
Noca_4639
Hypothetical protein; KEGG: fal:FRAAL6508 putative serine/threonine protein kinase.
  
    0.533
Noca_3325
TIGRFAM: prevent-host-death family protein; KEGG: fra:Francci3_0142 prevent-host-death protein.
  
     0.459
Noca_4231
KEGG: sma:SAV1484 hypothetical protein.
  
     0.424
Noca_4487
Carbohydrate ABC transporter membrane protein 2, CUT1 family; KEGG: sco:SCO0533 putative sugar transporter membrane protein; TC 3.A.1.1.-.
  
     0.409
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.