STRINGSTRING
Noca_4638 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4638" - N-acetyltransferase GCN5 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4638N-acetyltransferase GCN5 (222 aa)    
Predicted Functional Partners:
Noca_1910
Hypothetical protein (413 aa)
   
          0.688
Noca_4068
Endoribonuclease L-PSP (405 aa)
   
          0.661
Noca_4639
Hypothetical protein (506 aa)
              0.614
Noca_4069
Hypothetical protein (166 aa)
   
          0.532
Noca_2681
Prevent-host-death family protein; Antitoxin component of a toxin-antitoxin (TA) module (94 aa)
   
          0.525
Noca_2680
Plasmid stabilization system protein (98 aa)
   
          0.509
Noca_4580
Hypothetical protein (429 aa)
   
          0.504
Noca_4591
Regulatory protein TetR (200 aa)
   
          0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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