STRINGSTRING
Noca_4658 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4658" - MATE efflux family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4658MATE efflux family protein (459 aa)    
Predicted Functional Partners:
Noca_4659
Hypothetical protein (179 aa)
              0.712
Noca_1912
PhoH family protein (345 aa)
       
      0.639
Noca_0374
Methyltransferase small (486 aa)
 
        0.537
Noca_4660
Hypothetical protein (400 aa)
              0.530
Noca_3294
Phospholipid/glycerol acyltransferase (267 aa)
 
 
  0.511
Noca_2946
Hypothetical protein (198 aa)
   
          0.458
Noca_2458
Hypothetical protein (175 aa)
   
          0.439
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (938 aa)
   
        0.425
rbfA
Ribosome-binding factor A; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (162 aa)
   
        0.425
Noca_3104
Phospholipid/glycerol acyltransferase (247 aa)
     
  0.423
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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