STRINGSTRING
Noca_4689 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4689" - N-acetyltransferase GCN5 in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4689N-acetyltransferase GCN5 (224 aa)    
Predicted Functional Partners:
Noca_3519
Hypothetical protein (135 aa)
   
          0.759
Noca_2368
Sporulation and cell division protein SsgA (118 aa)
   
          0.718
Noca_4690
Class I and II aminotransferase (439 aa)
              0.706
Noca_4691
D-alanine--D-alanine ligase; Cell wall formation (323 aa)
              0.697
Noca_0964
Hypothetical protein (445 aa)
   
          0.669
Noca_0327
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (103 aa)
   
          0.665
Noca_3138
ErfK/YbiS/YcfS/YnhG family protein (402 aa)
   
          0.658
Noca_4341
Adenylosuccinate lyase (476 aa)
   
          0.616
Noca_3035
Hypothetical protein (210 aa)
   
          0.615
Noca_1716
Anti-sigma factor (143 aa)
   
          0.614
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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