Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0046 | Cgl0047 | cg0063 | cg0064 | Secreted PROTEIN. | Conserved hypothetical protein. | 0.999 |
Cgl0046 | odhI | cg0063 | cg1630 | Secreted PROTEIN. | PUTATIVE SIGNAL TRANSDUCTION PROTEIN, FHA DOMAIN; An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase. | 0.772 |
Cgl0046 | pbpA | cg0063 | cg0060 | Secreted PROTEIN. | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE. | 0.977 |
Cgl0046 | pknA | cg0063 | cg0059 | Secreted PROTEIN. | SERINE/THREONINE PROTEIN KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.989 |
Cgl0046 | pknB | cg0063 | cg0057 | Secreted PROTEIN. | EUKARYOTIC-TYPE SERINE/THREONINE KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.994 |
Cgl0046 | pknG | cg0063 | cg3046 | Secreted PROTEIN. | Serine/threonine protein kinase. | 0.803 |
Cgl0046 | pknL | cg0063 | cg2388 | Secreted PROTEIN. | PUTATIVE SERINE/THREONINE PROTEIN KINASE. | 0.981 |
Cgl0046 | ppp | cg0063 | cg0062 | Secreted PROTEIN. | PROTEIN PHOSPHATASE. | 0.986 |
Cgl0046 | rodA | cg0063 | cg0061 | Secreted PROTEIN. | PUTATIVE FTSW/RODA/SPOVE FAMILY CELL CYCLE PROTEIN; Belongs to the SEDS family. | 0.950 |
Cgl0047 | Cgl0046 | cg0064 | cg0063 | Conserved hypothetical protein. | Secreted PROTEIN. | 0.999 |
Cgl0047 | odhI | cg0064 | cg1630 | Conserved hypothetical protein. | PUTATIVE SIGNAL TRANSDUCTION PROTEIN, FHA DOMAIN; An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase. | 0.779 |
Cgl0047 | pbpA | cg0064 | cg0060 | Conserved hypothetical protein. | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE. | 0.939 |
Cgl0047 | pknA | cg0064 | cg0059 | Conserved hypothetical protein. | SERINE/THREONINE PROTEIN KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.981 |
Cgl0047 | pknB | cg0064 | cg0057 | Conserved hypothetical protein. | EUKARYOTIC-TYPE SERINE/THREONINE KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.992 |
Cgl0047 | pknG | cg0064 | cg3046 | Conserved hypothetical protein. | Serine/threonine protein kinase. | 0.753 |
Cgl0047 | pknL | cg0064 | cg2388 | Conserved hypothetical protein. | PUTATIVE SERINE/THREONINE PROTEIN KINASE. | 0.972 |
Cgl0047 | ppp | cg0064 | cg0062 | Conserved hypothetical protein. | PROTEIN PHOSPHATASE. | 0.975 |
Cgl0047 | rodA | cg0064 | cg0061 | Conserved hypothetical protein. | PUTATIVE FTSW/RODA/SPOVE FAMILY CELL CYCLE PROTEIN; Belongs to the SEDS family. | 0.942 |
fmu | pknB | cg1802 | cg0057 | PUTATIVE 16S RRNA M(5)C 967 METHYLTRANSFERASE; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | EUKARYOTIC-TYPE SERINE/THREONINE KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.532 |
fmu | pknL | cg1802 | cg2388 | PUTATIVE 16S RRNA M(5)C 967 METHYLTRANSFERASE; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | PUTATIVE SERINE/THREONINE PROTEIN KINASE. | 0.535 |
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