Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0046 | Cgl0047 | cg0063 | cg0064 | Secreted PROTEIN. | Conserved hypothetical protein. | 0.999 |
Cgl0046 | ftsZ | cg0063 | cg2366 | Secreted PROTEIN. | Cell division GTPase; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.826 |
Cgl0046 | odhI | cg0063 | cg1630 | Secreted PROTEIN. | PUTATIVE SIGNAL TRANSDUCTION PROTEIN, FHA DOMAIN; An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase. | 0.772 |
Cgl0046 | pbpA | cg0063 | cg0060 | Secreted PROTEIN. | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE. | 0.977 |
Cgl0046 | pknA | cg0063 | cg0059 | Secreted PROTEIN. | SERINE/THREONINE PROTEIN KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.989 |
Cgl0046 | pknB | cg0063 | cg0057 | Secreted PROTEIN. | EUKARYOTIC-TYPE SERINE/THREONINE KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.994 |
Cgl0046 | pknG | cg0063 | cg3046 | Secreted PROTEIN. | Serine/threonine protein kinase. | 0.803 |
Cgl0046 | ppp | cg0063 | cg0062 | Secreted PROTEIN. | PROTEIN PHOSPHATASE. | 0.986 |
Cgl0046 | rodA | cg0063 | cg0061 | Secreted PROTEIN. | PUTATIVE FTSW/RODA/SPOVE FAMILY CELL CYCLE PROTEIN; Belongs to the SEDS family. | 0.950 |
Cgl0047 | Cgl0046 | cg0064 | cg0063 | Conserved hypothetical protein. | Secreted PROTEIN. | 0.999 |
Cgl0047 | ftsZ | cg0064 | cg2366 | Conserved hypothetical protein. | Cell division GTPase; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.623 |
Cgl0047 | odhI | cg0064 | cg1630 | Conserved hypothetical protein. | PUTATIVE SIGNAL TRANSDUCTION PROTEIN, FHA DOMAIN; An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase. | 0.779 |
Cgl0047 | pbpA | cg0064 | cg0060 | Conserved hypothetical protein. | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE. | 0.939 |
Cgl0047 | pknA | cg0064 | cg0059 | Conserved hypothetical protein. | SERINE/THREONINE PROTEIN KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.981 |
Cgl0047 | pknB | cg0064 | cg0057 | Conserved hypothetical protein. | EUKARYOTIC-TYPE SERINE/THREONINE KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.992 |
Cgl0047 | pknG | cg0064 | cg3046 | Conserved hypothetical protein. | Serine/threonine protein kinase. | 0.753 |
Cgl0047 | ppp | cg0064 | cg0062 | Conserved hypothetical protein. | PROTEIN PHOSPHATASE. | 0.975 |
Cgl0047 | rodA | cg0064 | cg0061 | Conserved hypothetical protein. | PUTATIVE FTSW/RODA/SPOVE FAMILY CELL CYCLE PROTEIN; Belongs to the SEDS family. | 0.942 |
ftsZ | Cgl0046 | cg2366 | cg0063 | Cell division GTPase; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Secreted PROTEIN. | 0.826 |
ftsZ | Cgl0047 | cg2366 | cg0064 | Cell division GTPase; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Conserved hypothetical protein. | 0.623 |
page 1 of 5