STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXYLULOSE KINASE. (460 aa)    
Predicted Functional Partners:
xylC
BENZALDEHYDE DEHYDROGENASE; Belongs to the aldehyde dehydrogenase family.
   
  
 0.981
rpe
RIBULOSE-5-PHOSPHATE-3-EPIMERASE; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.939
rbtT
PUTATIVE RIBITOL TRANSPORTER.
 
  
 0.896
Cgl0111
Bacterial regulatory proteins, deoR family.
 
  
 0.874
sixA
PHOSPHOHISTIDINE PHOSPHATASE.
     
 0.791
tal
TRANSALDOLASE; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.771
mtlD
MANNITOL 2-DEHYDROGENASE.
 
  
 0.770
ptsF
SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN.
     
 0.751
glpD
GLYCEROL-3-PHOSPHATE DEHYDROGENASE.
 
  
 0.747
iolG
PUTATIVE OXIDOREDUCTASE MYO-INOSITOL 2-DEHYDROGENA; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
  
  
 0.648
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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