STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0149Methylated-DNA--protein-cysteine methyltransferase. (114 aa)    
Predicted Functional Partners:
Cgl0147
CONSERVED HYPOTHETICAL PROTEIN.
  
  
 0.933
Cgl1373
Superfamily I DNA or RNA helicase.
   
  
 0.916
Cgl0148
Glyoxalase/Bleomycin resistance protein/Dioxygenas.
       0.779
Cgl0146
PUTATIVE LYSE TYPE TRANSLOCATOR.
  
    0.684
uvrC
Nuclease subunit of the excinuclease ABC complex; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
  
 
 0.653
tagA2
PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE I PROTEIN.
       0.633
uvrA
Excinuclease ATPase subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
    
 
 0.575
Cgl0144
PUTATIVE DNA REPAIR PROTEIN.
       0.555
Cgl0150
Conserved hypothetical protein.
  
    0.468
Cgl0782
Conserved hypothetical protein.
  
    0.412
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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