Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0155 | Cgl0156 | cg0194 | cg0195 | Hypothetical secreted protein. | Membrane protein. | 0.835 |
Cgl0155 | pepO | cg0194 | cg0193 | Hypothetical secreted protein. | ENDOPEPTIDASE O. | 0.676 |
Cgl0156 | Cgl0155 | cg0195 | cg0194 | Membrane protein. | Hypothetical secreted protein. | 0.835 |
Cgl0156 | Cgl1508 | cg0195 | cg1702 | Membrane protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.454 |
Cgl0156 | cmr | cg0195 | cg3075 | Membrane protein. | MULTIDRUG RESISTANCE PROTEIN. | 0.433 |
Cgl0156 | pepO | cg0195 | cg0193 | Membrane protein. | ENDOPEPTIDASE O. | 0.676 |
Cgl1508 | Cgl0156 | cg1702 | cg0195 | Hypothetical protein predicted by Glimmer/Critica. | Membrane protein. | 0.454 |
cmr | Cgl0156 | cg3075 | cg0195 | MULTIDRUG RESISTANCE PROTEIN. | Membrane protein. | 0.433 |
pepO | Cgl0155 | cg0193 | cg0194 | ENDOPEPTIDASE O. | Hypothetical secreted protein. | 0.676 |
pepO | Cgl0156 | cg0193 | cg0195 | ENDOPEPTIDASE O. | Membrane protein. | 0.676 |