STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brnEBranched chain amino acid exporter, small subunit. (108 aa)    
Predicted Functional Partners:
brnF
Branched chain amino acid exporter, large subunit.
  
  
 0.996
lrp
Leucine responsive regulator.
  
  
 0.840
mdh2
Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
   
  
 0.609
ilvB
ACETOLACTATE SYNTHASE.
      
 0.570
ilvN
ACETOHYDROXYACID SYNTHASE SMALL SUBUNIT.
      
 0.454
cg0311
Secreted protein.
  
    0.452
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.