Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0261 | Cgl1512 | cg0317 | cg1707 | Predicted transcriptional regulators; Unnamed protein product. | Low molecular weight phosphotyrosine protein phosphatase. | 0.967 |
Cgl0261 | arsC1 | cg0317 | cg0318 | Predicted transcriptional regulators; Unnamed protein product. | PUTATIVE HEAVY METAL RESISTANCE MEMBRANE PROTEIN. | 0.776 |
Cgl0261 | arsX | cg0317 | cg0319 | Predicted transcriptional regulators; Unnamed protein product. | ARSENATE REDUCTASE; Involved in defense against toxic arsenate. Involved in the mycothiol/myoredoxin redox pathway which uses a mycothioltransferase mechanism; facilitates adduct formation between arsenate and mycothiol. | 0.984 |
Cgl1512 | Cgl0261 | cg1707 | cg0317 | Low molecular weight phosphotyrosine protein phosphatase. | Predicted transcriptional regulators; Unnamed protein product. | 0.967 |
Cgl1512 | Cgl2963 | cg1707 | cg3283 | Low molecular weight phosphotyrosine protein phosphatase. | Hypothetical protein predicted by Glimmer. | 0.662 |
Cgl1512 | Cgl2966 | cg1707 | cg3286 | Low molecular weight phosphotyrosine protein phosphatase. | Putative secreted protein. | 0.637 |
Cgl1512 | Cgl2967 | cg1707 | cg3287 | Low molecular weight phosphotyrosine protein phosphatase. | Secreted multicopper oxidase. | 0.627 |
Cgl1512 | arsC1 | cg1707 | cg0318 | Low molecular weight phosphotyrosine protein phosphatase. | PUTATIVE HEAVY METAL RESISTANCE MEMBRANE PROTEIN. | 0.974 |
Cgl1512 | arsX | cg1707 | cg0319 | Low molecular weight phosphotyrosine protein phosphatase. | ARSENATE REDUCTASE; Involved in defense against toxic arsenate. Involved in the mycothiol/myoredoxin redox pathway which uses a mycothioltransferase mechanism; facilitates adduct formation between arsenate and mycothiol. | 0.472 |
Cgl1512 | cg3289 | cg1707 | cg3289 | Low molecular weight phosphotyrosine protein phosphatase. | Thiol-disulfide isomerase or thioredoxin. | 0.651 |
Cgl1512 | cgtR9 | cg1707 | cg3285 | Low molecular weight phosphotyrosine protein phosphatase. | Putative two component response regulator. | 0.637 |
Cgl1512 | cgtS9 | cg1707 | cg3284 | Low molecular weight phosphotyrosine protein phosphatase. | Probable two component sensor kinase. | 0.690 |
Cgl1512 | ctpA | cg1707 | cg0464 | Low molecular weight phosphotyrosine protein phosphatase. | COPPER-TRANSPORTING ATPASE. | 0.698 |
Cgl2963 | Cgl1512 | cg3283 | cg1707 | Hypothetical protein predicted by Glimmer. | Low molecular weight phosphotyrosine protein phosphatase. | 0.662 |
Cgl2963 | Cgl2966 | cg3283 | cg3286 | Hypothetical protein predicted by Glimmer. | Putative secreted protein. | 0.803 |
Cgl2963 | Cgl2967 | cg3283 | cg3287 | Hypothetical protein predicted by Glimmer. | Secreted multicopper oxidase. | 0.748 |
Cgl2963 | arsC1 | cg3283 | cg0318 | Hypothetical protein predicted by Glimmer. | PUTATIVE HEAVY METAL RESISTANCE MEMBRANE PROTEIN. | 0.669 |
Cgl2963 | arsX | cg3283 | cg0319 | Hypothetical protein predicted by Glimmer. | ARSENATE REDUCTASE; Involved in defense against toxic arsenate. Involved in the mycothiol/myoredoxin redox pathway which uses a mycothioltransferase mechanism; facilitates adduct formation between arsenate and mycothiol. | 0.661 |
Cgl2963 | cg3289 | cg3283 | cg3289 | Hypothetical protein predicted by Glimmer. | Thiol-disulfide isomerase or thioredoxin. | 0.802 |
Cgl2963 | cgtR9 | cg3283 | cg3285 | Hypothetical protein predicted by Glimmer. | Putative two component response regulator. | 0.953 |
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