STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0287Metal-dependent hydrolase of the TIM-barrel fold. (314 aa)    
Predicted Functional Partners:
fabG1
3-OXOACYL-(ACYL-CARRIER PROTEIN) REDUCTASE.
 
 
 0.970
Cgl0289
Acyl dehydratase.
 
    0.850
fadE
GLUTARYL-COA DEHYDROGENASE.
  
 
 0.823
Cgl0285
PUTATIVE TRANSCRIPTION REGULATOR PROTEIN, MarR fam.
 
     0.821
pobB
4-HYDROXYBENZOATE 3-MONOOXYGENASE.
 
  
 0.607
Cgl0422
Phosphate isomerase/epimerase.
 
    0.575
fadD1
PUTATIVE FATTY-ACID--COA LIGASE TRANSMEMBRANE PROTEIN.
 
  
 0.532
Cgl0290
METALLO-BETA-LACTAMASE SUPERFAMILY PROTEIN.
       0.487
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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