Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0341 | Cgl0733 | cg0411 | cg0840 | Putative membrane protein. | Conserved hypothetical protein. | 0.433 |
Cgl0341 | Cgl1837 | cg0411 | cg2058 | Putative membrane protein. | Hypothetical protein predicted by Glimmer and Critica. | 0.472 |
Cgl0341 | bglS | cg0411 | cg0385 | Putative membrane protein. | BETA-GLUCOSIDASE PRECURSOR-N-terminal domain. | 0.405 |
Cgl0341 | bglS-2 | cg0411 | cg0386 | Putative membrane protein. | BETA-GLUCOSIDASE-C-terminal domain. | 0.405 |
Cgl0341 | gltB | cg0411 | cg0229 | Putative membrane protein. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.426 |
Cgl0341 | nagA2 | cg0411 | cg3158 | Putative membrane protein. | BETA-N-ACETYLGLUCOSAMINIDASE PRECURSOR. | 0.405 |
Cgl0341 | psp4 | cg0411 | cg2805 | Putative membrane protein. | Putative secreted protein. | 0.471 |
Cgl0341 | rbfA | cg0411 | cg2175 | Putative membrane protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.475 |
Cgl0733 | Cgl0341 | cg0840 | cg0411 | Conserved hypothetical protein. | Putative membrane protein. | 0.433 |
Cgl0733 | gltB | cg0840 | cg0229 | Conserved hypothetical protein. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.482 |
Cgl1837 | Cgl0341 | cg2058 | cg0411 | Hypothetical protein predicted by Glimmer and Critica. | Putative membrane protein. | 0.472 |
Cgl1837 | psp4 | cg2058 | cg2805 | Hypothetical protein predicted by Glimmer and Critica. | Putative secreted protein. | 0.853 |
bglS | Cgl0341 | cg0385 | cg0411 | BETA-GLUCOSIDASE PRECURSOR-N-terminal domain. | Putative membrane protein. | 0.405 |
bglS | bglS-2 | cg0385 | cg0386 | BETA-GLUCOSIDASE PRECURSOR-N-terminal domain. | BETA-GLUCOSIDASE-C-terminal domain. | 0.994 |
bglS-2 | Cgl0341 | cg0386 | cg0411 | BETA-GLUCOSIDASE-C-terminal domain. | Putative membrane protein. | 0.405 |
bglS-2 | bglS | cg0386 | cg0385 | BETA-GLUCOSIDASE-C-terminal domain. | BETA-GLUCOSIDASE PRECURSOR-N-terminal domain. | 0.994 |
gltB | Cgl0341 | cg0229 | cg0411 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | Putative membrane protein. | 0.426 |
gltB | Cgl0733 | cg0229 | cg0840 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | Conserved hypothetical protein. | 0.482 |
nagA2 | Cgl0341 | cg3158 | cg0411 | BETA-N-ACETYLGLUCOSAMINIDASE PRECURSOR. | Putative membrane protein. | 0.405 |
psp4 | Cgl0341 | cg2805 | cg0411 | Putative secreted protein. | Putative membrane protein. | 0.471 |
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