STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0378PREDICTED MEMBRANE PROTEIN. (101 aa)    
Predicted Functional Partners:
Cgl0376
PUTATIVE MEMBRANE PROTEIN.
  
    0.775
Cgl0377
Hypothetical protein.
  
    0.743
Cgl0375
Conserved hypothetical protein.
       0.506
Cgl0379
TETR-FAMILY TRANSCRIPTIONAL REGULATOR.
       0.472
Cgl0380
Permease, major facilitator superfamily.
       0.472
Cgl0381
Permease, major facilitator superfamily.
       0.472
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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