STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgtR4Putative two component response regulator. (232 aa)    
Predicted Functional Partners:
cgtS4
Probable two component sensor kinase.
 0.999
cgtS3
Probable two component sensor kinase.
 
 0.890
mtrB
Signal transduction histidine kinase.
 
 0.880
cgtS9
Probable two component sensor kinase.
 
 0.873
cgtS5
Probable two component sensor kinase.
 
 0.863
cgtS2
Probable two component sensor kinase.
 
 0.843
gpmA
PHOSPHOGLYCEROMUTASE 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.827
cgtS1
PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE.
 
 0.818
cgtR6
Putative two component response regulator.
  
 
 0.767
Cgl2394
ATP-dependent transcriptional regulator, LuxR family.
  
 
 0.730
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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