Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0451 | Cgl0452 | cg0534 | cg0535 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE. | 0.570 |
Cgl0451 | Cgl0453 | cg0534 | cg0536 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | 0.565 |
Cgl0451 | Cgl0454 | cg0534 | cg0537 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | PUTATIVE TRANSCRIPTIONAL REGULATOR LYSR-TYPE; Belongs to the LysR transcriptional regulatory family. | 0.402 |
Cgl0451 | menE | cg0534 | cg0533 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | O-SUCCINYLBENZOIC ACID-COA LIGASE. | 0.940 |
Cgl0452 | Cgl0451 | cg0535 | cg0534 | PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE. | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | 0.570 |
Cgl0452 | Cgl0453 | cg0535 | cg0536 | PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE. | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | 0.999 |
Cgl0452 | Cgl0454 | cg0535 | cg0537 | PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE. | PUTATIVE TRANSCRIPTIONAL REGULATOR LYSR-TYPE; Belongs to the LysR transcriptional regulatory family. | 0.636 |
Cgl0452 | idhA3 | cg0535 | cg2313 | PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE. | MYO-INOSITOL 2-DEHYDROGENASE. | 0.655 |
Cgl0452 | menE | cg0535 | cg0533 | PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE. | O-SUCCINYLBENZOIC ACID-COA LIGASE. | 0.606 |
Cgl0453 | Cgl0451 | cg0536 | cg0534 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | 0.565 |
Cgl0453 | Cgl0452 | cg0536 | cg0535 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE. | 0.999 |
Cgl0453 | Cgl0454 | cg0536 | cg0537 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | PUTATIVE TRANSCRIPTIONAL REGULATOR LYSR-TYPE; Belongs to the LysR transcriptional regulatory family. | 0.792 |
Cgl0453 | Cgl2910 | cg0536 | cg3218 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | PYRUVATE KINASE-LIKE PROTEIN. | 0.697 |
Cgl0453 | dapB | cg0536 | cg2163 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | DIHYDRODIPICOLINATE REDUCTASE; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.747 |
Cgl0453 | hisH | cg0536 | cg2300 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | IMIDAZOLEGLYCEROL-PHOSPHATE SYNTHASE, AMIDOTRANSFERASE; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF (By similarity). | 0.720 |
Cgl0453 | idhA3 | cg0536 | cg2313 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | MYO-INOSITOL 2-DEHYDROGENASE. | 0.688 |
Cgl0453 | menA | cg0536 | cg0531 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.961 |
Cgl0453 | menE | cg0536 | cg0533 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | O-SUCCINYLBENZOIC ACID-COA LIGASE. | 0.561 |
Cgl0453 | nanA | cg0536 | cg2931 | PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. | N-ACETYLNEURAMINATE LYASE (ALDOLASE); Belongs to the DapA family. | 0.569 |
Cgl0454 | Cgl0451 | cg0537 | cg0534 | PUTATIVE TRANSCRIPTIONAL REGULATOR LYSR-TYPE; Belongs to the LysR transcriptional regulatory family. | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | 0.402 |
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