STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0453PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family. (316 aa)    
Predicted Functional Partners:
Cgl0452
PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE.
 
 
 0.999
menA
1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
   
  
 0.961
Cgl0454
PUTATIVE TRANSCRIPTIONAL REGULATOR LYSR-TYPE; Belongs to the LysR transcriptional regulatory family.
 
    0.792
dapB
DIHYDRODIPICOLINATE REDUCTASE; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
 
  
 0.747
hisH
IMIDAZOLEGLYCEROL-PHOSPHATE SYNTHASE, AMIDOTRANSFERASE; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF (By similarity).
   
  
 0.720
Cgl2910
PYRUVATE KINASE-LIKE PROTEIN.
   
  
 0.697
idhA3
MYO-INOSITOL 2-DEHYDROGENASE.
  
  
 0.688
nanA
N-ACETYLNEURAMINATE LYASE (ALDOLASE); Belongs to the DapA family.
  
    0.569
Cgl0451
PUTATIVE INTEGRAL MEMBRANE PROTEIN.
  
    0.565
menE
O-SUCCINYLBENZOIC ACID-COA LIGASE.
  
    0.561
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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