STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0455Putative serine protease (ClpP class). (105 aa)    
Predicted Functional Partners:
Cgl0454
PUTATIVE TRANSCRIPTIONAL REGULATOR LYSR-TYPE; Belongs to the LysR transcriptional regulatory family.
  
    0.797
pitA
PUTATIVE LOW-AFFINITY PHOSPHATE TRANSPORT PROTEIN.
 
    0.747
Cgl0407
Conserved hypothetical protein, possibly secreted.
  
     0.643
Cgl0456
PUTATIVE DICARBOXYLIC ACID HYDROLASE.
 
    0.580
Cgl0452
PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE.
  
    0.533
Cgl0453
PUTATIVE 5-DEHYDRO-4-DEOXYGLUCARATE DEHYDRATASE; Belongs to the DapA family.
       0.526
Cgl1249
Putative membrane protein.
  
     0.512
menE
O-SUCCINYLBENZOIC ACID-COA LIGASE.
       0.504
Cgl0458
Hypothetical protein.
  
    0.482
Cgl0457
Hyppthetical protein.
  
    0.475
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.