STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alrALANINE RACEMASE; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids. (361 aa)    
Predicted Functional Partners:
ddlA
D-ALANINE--D-ALANINE LIGASE A; Cell wall formation.
 
 
 0.996
Cgl0589
ATPase or kinase.
  
 0.991
murF
D-ALANINE:D-ALANINE-ADDING ENZYME; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
   
 0.985
murI
GLUTAMATE RACEMASE; Provides the (R)-glutamate required for cell wall biosynthesis.
 
  
 0.825
Cgl2844
Aminotransferases class-I.
    
 0.815
murD
UDP-N-ACETYLMURAMOYLALANINE D-GLUTAMATE LIGASE.
 
 
 0.725
ftsI
PENICILLIN-BINDING PROTEIN 2X.
 
   
 0.715
murC
PROBABLE UDP-N-ACETYLMURAMATE--ALANINE LIGASE PROTEIN; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.713
murA
UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE.
 
  
 0.695
murG
Peptidoglycan biosynthesis protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
   
 0.681
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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