Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0587 | Cgl0589 | cg0680 | cg0682 | Conserved hypothetical protein. | ATPase or kinase. | 0.644 |
Cgl0587 | Cgl0592 | cg0680 | cg0685 | Conserved hypothetical protein. | Homolog of metal-dependent proteases, putative molecular chaperone. | 0.513 |
Cgl0587 | Cgl0593 | cg0680 | cg0686 | Conserved hypothetical protein. | ACETYLTRANSFERASE, GNAT FAMILY. | 0.588 |
Cgl0587 | alr | cg0680 | cg0681 | Conserved hypothetical protein. | ALANINE RACEMASE; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids. | 0.678 |
Cgl0587 | gcp | cg0680 | cg0687 | Conserved hypothetical protein. | PROBABLE O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.527 |
Cgl0587 | nnr | cg0680 | cg0688 | Conserved hypothetical protein. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity). In the N-terminal section; belongs to the NnrE/AIBP family. | 0.421 |
Cgl0589 | Cgl0587 | cg0682 | cg0680 | ATPase or kinase. | Conserved hypothetical protein. | 0.644 |
Cgl0589 | Cgl0592 | cg0682 | cg0685 | ATPase or kinase. | Homolog of metal-dependent proteases, putative molecular chaperone. | 0.983 |
Cgl0589 | Cgl0593 | cg0682 | cg0686 | ATPase or kinase. | ACETYLTRANSFERASE, GNAT FAMILY. | 0.750 |
Cgl0589 | alr | cg0682 | cg0681 | ATPase or kinase. | ALANINE RACEMASE; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids. | 0.991 |
Cgl0589 | dnaN | cg0682 | cg0004 | ATPase or kinase. | DNA POLYMERASE III, BETA SUBUNIT; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.635 |
Cgl0589 | gcp | cg0682 | cg0687 | ATPase or kinase. | PROBABLE O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.963 |
Cgl0589 | miaA | cg0682 | cg2130 | ATPase or kinase. | TRNA DELTA-2-ISOPENTENYLPYROPHOSPHATE (IPP) TRANSFERASE; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.582 |
Cgl0589 | nnr | cg0682 | cg0688 | ATPase or kinase. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity). In the N-terminal section; belongs to the NnrE/AIBP family. | 0.824 |
Cgl0589 | pheT | cg0682 | cg1575 | ATPase or kinase. | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.544 |
Cgl0589 | recO | cg0682 | cg2509 | ATPase or kinase. | Recombinational DNA repair protein (RecF pathway); Involved in DNA repair and RecF pathway recombination. | 0.538 |
Cgl0592 | Cgl0587 | cg0685 | cg0680 | Homolog of metal-dependent proteases, putative molecular chaperone. | Conserved hypothetical protein. | 0.513 |
Cgl0592 | Cgl0589 | cg0685 | cg0682 | Homolog of metal-dependent proteases, putative molecular chaperone. | ATPase or kinase. | 0.983 |
Cgl0592 | Cgl0593 | cg0685 | cg0686 | Homolog of metal-dependent proteases, putative molecular chaperone. | ACETYLTRANSFERASE, GNAT FAMILY. | 0.991 |
Cgl0592 | alr | cg0685 | cg0681 | Homolog of metal-dependent proteases, putative molecular chaperone. | ALANINE RACEMASE; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids. | 0.675 |
page 1 of 4