Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0877 | coaA | cg0999 | cg1132 | PUTATIVE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN. | PANTOTHENATE KINASE. | 0.599 |
Cgl0877 | pdxT | cg0999 | cg0899 | PUTATIVE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN. | Glutamine amidotransferase involved in pyridoxine biosynthesis; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.620 |
Cgl2183 | coaA | cg2397 | cg1132 | Putative membrane protein. | PANTOTHENATE KINASE. | 0.562 |
coaA | Cgl0877 | cg1132 | cg0999 | PANTOTHENATE KINASE. | PUTATIVE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN. | 0.599 |
coaA | Cgl2183 | cg1132 | cg2397 | PANTOTHENATE KINASE. | Putative membrane protein. | 0.562 |
coaA | coaD | cg1132 | cg1501 | PANTOTHENATE KINASE. | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.985 |
coaA | coaE | cg1132 | cg1538 | PANTOTHENATE KINASE. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.785 |
coaA | dfp | cg1132 | cg1807 | PANTOTHENATE KINASE. | DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.964 |
coaA | glyA | cg1132 | cg1133 | PANTOTHENATE KINASE. | Serine Hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.659 |
coaA | pabAB | cg1132 | cg1134 | PANTOTHENATE KINASE. | PARA-AMINOBENZOATE SYNTHASE COMPONENT I and II. | 0.576 |
coaA | panC | cg1132 | cg0148 | PANTOTHENATE KINASE. | PANTOATE--BETA-ALANINE LIGASE PROTEIN; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.924 |
coaA | panC2 | cg1132 | cg2975 | PANTOTHENATE KINASE. | SIMILAR TO PANTOTHENATE SYNTHETASE. | 0.961 |
coaA | pdxT | cg1132 | cg0899 | PANTOTHENATE KINASE. | Glutamine amidotransferase involved in pyridoxine biosynthesis; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.636 |
coaD | coaA | cg1501 | cg1132 | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | PANTOTHENATE KINASE. | 0.985 |
coaD | coaE | cg1501 | cg1538 | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.992 |
coaD | dfp | cg1501 | cg1807 | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.987 |
coaD | panC | cg1501 | cg0148 | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | PANTOATE--BETA-ALANINE LIGASE PROTEIN; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.472 |
coaE | coaA | cg1538 | cg1132 | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | PANTOTHENATE KINASE. | 0.785 |
coaE | coaD | cg1538 | cg1501 | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.992 |
coaE | dfp | cg1538 | cg1807 | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.528 |
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