STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1248Siderophore-interacting protein. (283 aa)    
Predicted Functional Partners:
Cgl1257
ABC-type cobalamin/Fe3+-siderophores transport system secreted component.
  
  
 0.859
ripA
AraC-type DNA-binding domain-containing protein; Under iron limitation, RipA negatively controls the expression of the acn (aconitase), catA (catechol 1,2 dioxygenase), leuCD (isopropylmalate dehydratase), narKGHJI (nitrite/nitrate transporter and nitrate reductase), sdhCAB (succinate dehydrogenase), pta (phosphotransacetylase) and katA (catalase) genes. Binds to the consensus sequence in the promoter region.
   
    0.857
Cgl1178
PUTATIVE SECRETED HYDROLASE.
      
 0.776
mrcB
Membrane carboxypeptidase, PENICILLIN-BINDING PROTEIN.
      
 0.728
Cgl1715
Putative secreted protein.
   
    0.637
Cgl0665
Siderophore-interacting protein.
 
   
0.617
pstS
ABC-type phosphate transport system, secreted component; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
      
 0.610
gpx
GLUTATHIONE PEROXIDASE; Belongs to the glutathione peroxidase family.
 
 
    0.593
Cgl0392
Conserved secreted protein.
  
    0.592
gatC
GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE (SUBUNIT C); Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.588
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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