STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1287PUTATIVE ALIPHATIC SULFONATES UPTAKE ABC TRANSPORTER SECRETED SOLUTE-BINDING PROTEIN. (354 aa)    
Predicted Functional Partners:
Cgl2057
ABC-type multidrug transport system, ATPase component.
 
    
 0.981
Cgl1680
Putative secreted protein.
   
  
 0.980
Cgl1733
Transposase.
      
 0.916
Cgl2132
ABC-type amino acid transport system, secreted component.
  
  
 0.712
embC
Probable arabinosyltransferase, membrane protein.
   
  
 0.670
Cgl1392
Acyltransferase family, membrane protein.
     
 0.609
Cgl0545
Membrane protein.
   
  
 0.606
Cgl0769
Membrane protein.
   
  
 0.606
cg1910
Putative secreted or membrane protein.
      
 0.606
ssuC
ALIPHATIC SULFONATES TRANSMEMBRANE ABC TRANSPORTERPROTEIN.
 
  
 0.593
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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