STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1405Conserved hypothetical protein; Belongs to the UPF0434 family. (59 aa)    
Predicted Functional Partners:
Cgl2601
HIT family hydrolase.
  
    0.863
tyrS
TYROSYL-TRNA SYNTHETASE; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
  
    0.772
Cgl1404
Putative secreted protein.
  
    0.735
Cgl1402
Putative secreted protein.
       0.732
Cgl1403
Secreted Mg-chelatase subunit.
       0.732
argH
ARGININOSUCCINATE LYASE.
       0.628
argG
ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
    0.567
argD
ACETYLORNITHINE AMINOTRANSFERASE; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
    0.479
argR
ARGININE REPRESSOR; Regulates arginine biosynthesis genes.
       0.479
argB
ACETYLGLUTAMATE KINASE; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
    0.476
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.