STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepEPROLINE DIPEPTIDASE. (379 aa)    
Predicted Functional Partners:
Cgl2599
AMINOTRANSFERASE CLASS I PROTEIN.
  
 
 0.901
Cgl1486
Short-chain dehydrogenase/reductase.
  
    0.844
Cgl0575
SERINE PROTEASE; Belongs to the peptidase S8 family.
  
  
 0.814
map1
METHIONINE AMINOPEPTIDASE; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
  
 0.729
Cgl1488
Trypsin-like serine protease.
  
  
 0.694
ribG
PUTATIVE BIFUNCTIONAL RIBOFLAVIN-SPECIFIC DEAMINASE/REDUCTASE; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.693
cobL
PRECORRIN-6Y C5,15-METHYLTRANSFERASE (DECARBOXYLATING).
      0.496
Cgl1543
Putative nucleoside-diphosphate-sugar epimerase.
   
    0.474
clpC
PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN); Belongs to the ClpA/ClpB family.
   
  
 0.456
hisS
HISTIDYL-TRNA SYNTHETASE.
 
  
 0.443
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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