STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufBComponent of an uncharacterized iron-regulated ABC-type transporter. (481 aa)    
Predicted Functional Partners:
sufC
Iron-regulated ABC transporter ATPase subunit.
 
 0.999
nifS2
CYSTEINE DESULFHYDRASE / SELENOCYSTEINE LYASE; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.998
Cgl1565
Predicted transcriptional regulator.
  
    0.975
Cgl1559
Predicted metal-sulfur cluster biosynthetic enzyme.
 
  
 0.947
sufD
Components of an uncharacterized iron-regulated ABC-type transporter.
 
  
0.939
Cgl1560
NifU homologs involved in Fe-S cluster formation.
 
  
 0.932
Cgl0202
AMINOTRANSFERASE.
  
 
 0.605
Cgl1567
ABC-type multidrug transport system, ATPase component.
  
    0.580
mptB
Putative membrane protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi-mannosylated polymer (LM- B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)-(1->3)- glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue; Belongs to the MptA/B family.
  
    0.579
Cgl1568
ABC-type multidrug transport system, permease component.
       0.576
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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