STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1638Membrane protein. (619 aa)    
Predicted Functional Partners:
Cgl1639
Conserved hypothetical protein.
 
  
 0.997
Cgl1640
Bacterial regulatory proteins, tetR family.
  
  
 0.983
Cgl1641
Conserved hypothetical protein.
     
 0.981
Cgl0633
PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN.
   
  
 0.960
Cgl1637
Superfamily II DNA/RNA helicase, SNF2 family.
  
    0.684
citB
TWO-COMPONENT RESPONSE REGULATOR CitB.
   
  
 0.683
acnR
TRANSCRIPTIONAL REGULATOR, TETR FAMILY; AcnR negatively controls the expression of the aconitase gene acn. Binds to the imperfect inverted repeat in the acn promoter region.
  
  
 0.622
mcbR
TetR-type transcriptional regulator of sulfur metabolism.
  
  
 0.475
rpmF
Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.426
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.