STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1924Superfamily II DNA or RNA helicase. (850 aa)    
Predicted Functional Partners:
Cgl0047
Conserved hypothetical protein.
  
     0.669
Cgl1923
CONSERVED HYPOTHETICAL PROTEIN.
  
    0.656
oxyR
HYDROGEN PEROXIDE SENSING REGULATOR; Belongs to the LysR transcriptional regulatory family.
       0.640
hrpA
PROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN.
 
    0.567
odhI
PUTATIVE SIGNAL TRANSDUCTION PROTEIN, FHA DOMAIN; An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase.
  
     0.515
Cgl0046
Secreted PROTEIN.
  
     0.496
secG
Preprotein translocase SecG subunit; Involved in protein export. Participates in an early event of protein translocation (By similarity); Belongs to the SecG family.
  
     0.478
Cgl1922
Conserved hypothetical protein.
       0.472
rnd
PROBABLE RIBONUCLEASE D PROTEIN.
  
     0.446
ihf
Putative integration host factor cIHF.
  
     0.401
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.